Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CROCCP5-201ENST00000436658 830 ntBASIC12.06□□□□□ -0.48
APOC3P02656 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC3P02656 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC3P02656 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC3P02656 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC3P02656 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC3P02656 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.06□□□□□ -0.48
APOC3P02656 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 NCLP1-201ENST00000445357 1963 ntBASIC12.06□□□□□ -0.48
APOC3P02656 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
APOC3P02656 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
APOC3P02656 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC3P02656 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC3P02656 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC3P02656 KRT18P22-201ENST00000402024 1347 ntBASIC12.06□□□□□ -0.48
APOC3P02656 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC3P02656 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC3P02656 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
APOC3P02656 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC3P02656 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
APOC3P02656 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
APOC3P02656 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC3P02656 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
APOC3P02656 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.05□□□□□ -0.48
APOC3P02656 CSPG4P13-202ENST00000567704 4801 ntBASIC12.05□□□□□ -0.48
APOC3P02656 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 SIGLEC16-201ENST00000599858 1437 ntBASIC12.05□□□□□ -0.48
APOC3P02656 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
APOC3P02656 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
APOC3P02656 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.05□□□□□ -0.48
APOC3P02656 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.05□□□□□ -0.48
APOC3P02656 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 CDCA4P2-201ENST00000441182 718 ntBASIC12.05□□□□□ -0.48
APOC3P02656 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.05□□□□□ -0.48
APOC3P02656 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.05□□□□□ -0.48
APOC3P02656 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.05□□□□□ -0.48
APOC3P02656 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.05□□□□□ -0.48
APOC3P02656 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.05□□□□□ -0.48
APOC3P02656 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 AC135782.3-201ENST00000562782 2105 ntBASIC12.05□□□□□ -0.48
APOC3P02656 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 Z98257.2-202ENST00000641138 1548 ntBASIC12.05□□□□□ -0.48
APOC3P02656 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
APOC3P02656 AL357140.3-201ENST00000639753 1983 ntBASIC12.05□□□□□ -0.48
APOC3P02656 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC3P02656 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC3P02656 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms