Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.94■□□□□ 0.14
TIMP1P01033 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 RN7SKP109-201ENST00000410592 316 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.94■□□□□ 0.14
TIMP1P01033 KRT17P4-201ENST00000429445 819 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 ERP29P1-201ENST00000442902 706 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.94■□□□□ 0.14
TIMP1P01033 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 RPL18AP8-201ENST00000486071 528 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.94■□□□□ 0.14
TIMP1P01033 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.94■□□□□ 0.14
TIMP1P01033 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
TIMP1P01033 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 FAM90A21P-201ENST00000510875 1396 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 FAM90A15P-201ENST00000514465 1395 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 FAM90A6P-201ENST00000515148 1394 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 FAM90A16P-201ENST00000526662 1395 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 FAM90A9P-201ENST00000527940 1395 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 FAM90A5P-201ENST00000528738 1395 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 FAM90A14P-201ENST00000530386 1395 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 FAM90A13P-201ENST00000534703 1395 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.94■□□□□ 0.14
TIMP1P01033 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.94■□□□□ 0.14
TIMP1P01033 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TIMP1P01033 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.93■□□□□ 0.14
TIMP1P01033 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.93■□□□□ 0.14
TIMP1P01033 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TIMP1P01033 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TIMP1P01033 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TIMP1P01033 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TIMP1P01033 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 AC073869.2-201ENST00000417338 1026 ntBASIC15.93■□□□□ 0.14
TIMP1P01033 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.93■□□□□ 0.14
TIMP1P01033 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.93■□□□□ 0.14
TIMP1P01033 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 DDX39AP1-201ENST00000445147 1181 ntBASIC15.93■□□□□ 0.14
TIMP1P01033 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 FAM86B3P-203ENST00000523992 854 ntBASIC15.93■□□□□ 0.14
TIMP1P01033 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
TIMP1P01033 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 AC055811.3-201ENST00000584952 686 ntBASIC15.93■□□□□ 0.14
TIMP1P01033 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TIMP1P01033 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
TIMP1P01033 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TIMP1P01033 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TIMP1P01033 AC009093.10-201ENST00000641956 1442 ntBASIC15.93■□□□□ 0.14
TIMP1P01033 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TIMP1P01033 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TIMP1P01033 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TIMP1P01033 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TIMP1P01033 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TIMP1P01033 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms