Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 LRRC59-203ENST00000576448 1531 ntBASIC14.55□□□□□ -0.08
CPNE3O75131 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPNE3O75131 OR2I1P-209ENST00000641730 5365 ntBASIC14.55□□□□□ -0.08
CPNE3O75131 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CPNE3O75131 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CPNE3O75131 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CPNE3O75131 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CPNE3O75131 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CPNE3O75131 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
CPNE3O75131 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 PFN1P12-201ENST00000455938 534 ntBASIC14.54□□□□□ -0.08
CPNE3O75131 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 RNA5SP486-201ENST00000515961 83 ntBASIC14.54□□□□□ -0.08
CPNE3O75131 FAM8A2P-201ENST00000528813 1142 ntBASIC14.54□□□□□ -0.08
CPNE3O75131 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.54□□□□□ -0.08
CPNE3O75131 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.54□□□□□ -0.08
CPNE3O75131 RN7SL560P-201ENST00000577943 264 ntBASIC14.54□□□□□ -0.08
CPNE3O75131 MIR4538-201ENST00000581377 78 ntBASIC14.54□□□□□ -0.08
CPNE3O75131 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE3O75131 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE3O75131 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE3O75131 AC009542.2-202ENST00000619004 1067 ntBASIC14.54□□□□□ -0.08
CPNE3O75131 AL645728.2-202ENST00000641679 227 ntBASIC14.54□□□□□ -0.08
CPNE3O75131 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE3O75131 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE3O75131 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.54□□□□□ -0.08
CPNE3O75131 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CPNE3O75131 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CPNE3O75131 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CPNE3O75131 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CPNE3O75131 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CPNE3O75131 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CPNE3O75131 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE3O75131 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE3O75131 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE3O75131 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.53□□□□□ -0.08
CPNE3O75131 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 AHCYP2-201ENST00000430630 1300 ntBASIC14.53□□□□□ -0.08
CPNE3O75131 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE3O75131 RPL5P21-201ENST00000404620 815 ntBASIC14.53□□□□□ -0.08
CPNE3O75131 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.53□□□□□ -0.08
CPNE3O75131 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms