Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TNRC18O15417 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 GRPEL2P1-201ENST00000453145 339 ntBASIC15.62■□□□□ 0.09
TNRC18O15417 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC15.62■□□□□ 0.09
TNRC18O15417 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.62■□□□□ 0.09
TNRC18O15417 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC15.62■□□□□ 0.09
TNRC18O15417 AP005264.5-201ENST00000590066 467 ntBASIC15.62■□□□□ 0.09
TNRC18O15417 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC15.62■□□□□ 0.09
TNRC18O15417 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.62■□□□□ 0.09
TNRC18O15417 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 AC011676.5-201ENST00000624864 2660 ntBASIC15.62■□□□□ 0.09
TNRC18O15417 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TNRC18O15417 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.62■□□□□ 0.09
TNRC18O15417 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.62■□□□□ 0.09
TNRC18O15417 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TNRC18O15417 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 AC139143.1-201ENST00000441772 1207 ntBASIC15.61■□□□□ 0.09
TNRC18O15417 AC093700.1-201ENST00000503348 717 ntBASIC15.61■□□□□ 0.09
TNRC18O15417 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC15.61■□□□□ 0.09
TNRC18O15417 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC15.61■□□□□ 0.09
TNRC18O15417 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.61■□□□□ 0.09
TNRC18O15417 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.61■□□□□ 0.09
TNRC18O15417 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.61■□□□□ 0.09
TNRC18O15417 LINC01101-201ENST00000622953 1884 ntBASIC15.61■□□□□ 0.09
TNRC18O15417 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC15.61■□□□□ 0.09
TNRC18O15417 MGST3-204ENST00000367888 778 ntTSL 3 BASIC15.61■□□□□ 0.09
TNRC18O15417 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TNRC18O15417 MKL1-204ENST00000402630 747 ntTSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC15.61■□□□□ 0.09
TNRC18O15417 IGHV7-56-201ENST00000518372 351 ntBASIC15.61■□□□□ 0.09
TNRC18O15417 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC15.61■□□□□ 0.09
TNRC18O15417 AC023090.2-201ENST00000625182 2110 ntBASIC15.61■□□□□ 0.09
TNRC18O15417 CDIPT-AS1-203ENST00000638164 713 ntBASIC15.61■□□□□ 0.09
TNRC18O15417 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.61■□□□□ 0.09
TNRC18O15417 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 AC103702.1-201ENST00000548801 2630 ntBASIC15.61■□□□□ 0.09
TNRC18O15417 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNRC18O15417 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.6■□□□□ 0.09
TNRC18O15417 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 RPS6-201ENST00000315377 863 ntTSL 3 BASIC15.6■□□□□ 0.09
TNRC18O15417 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TNRC18O15417 LINC00265-2P-201ENST00000413372 782 ntBASIC15.6■□□□□ 0.09
TNRC18O15417 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC15.6■□□□□ 0.09
TNRC18O15417 RN7SL794P-201ENST00000469816 280 ntBASIC15.6■□□□□ 0.09
TNRC18O15417 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC15.6■□□□□ 0.09
TNRC18O15417 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.6■□□□□ 0.09
TNRC18O15417 PDXDC2P-206ENST00000534700 1315 ntBASIC15.6■□□□□ 0.09
TNRC18O15417 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 APRT-202ENST00000426324 664 ntTSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC15.6■□□□□ 0.09
TNRC18O15417 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 AC017100.1-201ENST00000565978 1169 ntBASIC15.6■□□□□ 0.09
TNRC18O15417 AL133551.1-201ENST00000610279 1222 ntBASIC15.6■□□□□ 0.09
TNRC18O15417 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.6■□□□□ 0.09
TNRC18O15417 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.6■□□□□ 0.09
TNRC18O15417 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 AL133373.2-201ENST00000623187 2828 ntBASIC15.6■□□□□ 0.09
TNRC18O15417 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
TNRC18O15417 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.6■□□□□ 0.09
TNRC18O15417 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNRC18O15417 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 261.4 ms