Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC023141.5-201ENST00000458585 616 ntBASIC15.68■□□□□ 0.1
CCDC188H7C350 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC188H7C350 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.68■□□□□ 0.1
CCDC188H7C350 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC188H7C350 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC188H7C350 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
CCDC188H7C350 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC188H7C350 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCDC188H7C350 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC188H7C350 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC188H7C350 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCDC188H7C350 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC188H7C350 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC188H7C350 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC188H7C350 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCDC188H7C350 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC188H7C350 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC188H7C350 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC188H7C350 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC188H7C350 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC188H7C350 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC188H7C350 AL512356.2-201ENST00000546955 174 ntBASIC15.67■□□□□ 0.1
CCDC188H7C350 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC188H7C350 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC188H7C350 TEX28P1-201ENST00000613479 1221 ntBASIC15.67■□□□□ 0.1
CCDC188H7C350 TEX28P2-201ENST00000617764 1221 ntBASIC15.67■□□□□ 0.1
CCDC188H7C350 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC188H7C350 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CCDC188H7C350 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCDC188H7C350 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC188H7C350 AL158070.2-201ENST00000623713 1621 ntBASIC15.67■□□□□ 0.1
CCDC188H7C350 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC188H7C350 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC188H7C350 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC188H7C350 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC188H7C350 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC188H7C350 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC188H7C350 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC188H7C350 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC188H7C350 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC188H7C350 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC188H7C350 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 MIR4469-201ENST00000583919 79 ntBASIC15.66■□□□□ 0.1
CCDC188H7C350 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC188H7C350 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 CICP17-201ENST00000418553 2377 ntBASIC15.66■□□□□ 0.1
CCDC188H7C350 AC015818.8-201ENST00000587907 1519 ntBASIC15.66■□□□□ 0.1
CCDC188H7C350 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC188H7C350 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms