Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 OR7E115P-201ENST00000382617 1024 ntBASIC18.3■□□□□ 0.52
RGPD3A6NKT7 MED15P3-201ENST00000413613 326 ntBASIC18.3■□□□□ 0.52
RGPD3A6NKT7 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC18.3■□□□□ 0.52
RGPD3A6NKT7 MIR6125-201ENST00000618986 96 ntBASIC18.3■□□□□ 0.52
RGPD3A6NKT7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 U73169.1-201ENST00000395152 367 ntBASIC18.29■□□□□ 0.52
RGPD3A6NKT7 HLA-DMA-202ENST00000395303 1007 ntBASIC18.29■□□□□ 0.52
RGPD3A6NKT7 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 MIR2278-201ENST00000516344 96 ntBASIC18.29■□□□□ 0.52
RGPD3A6NKT7 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RGPD3A6NKT7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 EEF1DP2-201ENST00000433698 843 ntBASIC18.28■□□□□ 0.52
RGPD3A6NKT7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 AC090820.1-201ENST00000519722 591 ntBASIC18.28■□□□□ 0.52
RGPD3A6NKT7 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 MIR6893-201ENST00000613458 69 ntBASIC18.28■□□□□ 0.52
RGPD3A6NKT7 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 MROH4P-201ENST00000431302 1578 ntBASIC18.28■□□□□ 0.52
RGPD3A6NKT7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.28■□□□□ 0.52
RGPD3A6NKT7 LINC00528-201ENST00000600723 2160 ntBASIC18.27■□□□□ 0.52
RGPD3A6NKT7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 FDPSP7-201ENST00000429043 1054 ntBASIC18.27■□□□□ 0.52
RGPD3A6NKT7 BMF-206ENST00000558774 671 ntTSL 3 BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 AL512324.3-201ENST00000619383 882 ntBASIC18.27■□□□□ 0.52
RGPD3A6NKT7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RGPD3A6NKT7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms