Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 FAM86C2P-203ENST00000528684 1004 ntBASIC10.59□□□□□ -0.71
LINC01546A6NGU7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 RARRES2P9-201ENST00000565168 469 ntBASIC10.59□□□□□ -0.71
LINC01546A6NGU7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 AC087388.1-201ENST00000571370 1112 ntBASIC10.59□□□□□ -0.71
LINC01546A6NGU7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 AL139385.1-201ENST00000611744 3272 ntBASIC10.59□□□□□ -0.71
LINC01546A6NGU7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01546A6NGU7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AL359845.1-201ENST00000458202 1648 ntBASIC10.58□□□□□ -0.72
LINC01546A6NGU7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AL365209.1-201ENST00000624418 6473 ntBASIC10.58□□□□□ -0.72
LINC01546A6NGU7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AL671277.1-201ENST00000429656 993 ntBASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AC098831.1-202ENST00000438821 336 ntBASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AC105021.1-202ENST00000570572 669 ntBASIC10.58□□□□□ -0.72
LINC01546A6NGU7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AC000095.1-201ENST00000603208 874 ntBASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01546A6NGU7 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms