Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AC152010.1-201ENST00000415779 2006 ntBASIC17.18■□□□□ 0.34
CLIC4Q9Y696 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AC041040.2-201ENST00000622926 2899 ntBASIC17.18■□□□□ 0.34
CLIC4Q9Y696 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AC006504.5-208ENST00000588784 2401 ntBASIC17.17■□□□□ 0.34
CLIC4Q9Y696 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AGGF1P1-201ENST00000509500 2073 ntBASIC17.17■□□□□ 0.34
CLIC4Q9Y696 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLIC4Q9Y696 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AL391825.1-201ENST00000457671 1364 ntBASIC17.16■□□□□ 0.34
CLIC4Q9Y696 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 WASH4P-201ENST00000564273 1246 ntBASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AC138761.1-201ENST00000584393 385 ntBASIC17.16■□□□□ 0.34
CLIC4Q9Y696 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AC008494.3-201ENST00000606615 944 ntBASIC17.16■□□□□ 0.34
CLIC4Q9Y696 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms