Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 AC068418.2-201ENST00000577309 3703 ntBASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHB13Q9Y5F0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 REXO1L5P-201ENST00000622260 2098 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 LILRP1-201ENST00000444199 1370 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 GCNT6-201ENST00000379591 934 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AL139094.1-201ENST00000405549 1188 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 RNU6-775P-201ENST00000459318 96 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AC011495.1-201ENST00000498085 584 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AC009486.1-201ENST00000569860 813 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 CLUHP6-201ENST00000580789 941 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AC092574.1-201ENST00000609771 420 ntBASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHB13Q9Y5F0 AL157414.3-201ENST00000624276 1954 ntBASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 AC123912.3-201ENST00000600907 1367 ntBASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 CICP24-201ENST00000605464 2705 ntBASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 HLA-K-203ENST00000430151 1046 ntBASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 RN7SL752P-201ENST00000463779 287 ntBASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 IL12A-205ENST00000480787 863 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 AC118465.1-201ENST00000513820 1271 ntBASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHB13Q9Y5F0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms