Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 AC099548.2-209ENST00000480264 625 ntBASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 DUX4L45-201ENST00000566406 1057 ntBASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 AC244093.1-201ENST00000610837 814 ntBASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 AC138969.2-201ENST00000532739 9932 ntBASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NPIPA1Q9UND3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AHCYP2-201ENST00000430630 1300 ntBASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AC006001.1-201ENST00000325130 474 ntBASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AL590640.2-201ENST00000457038 527 ntBASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AC132938.4-201ENST00000623835 848 ntBASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPA1Q9UND3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms