Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 AC097376.2-205ENST00000610159 5334 ntBASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIMS3Q9UJD0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 TCAM1P-207ENST00000485295 1537 ntBASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RIMS3Q9UJD0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RIMS3Q9UJD0 AL079307.3-201ENST00000556114 283 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms