Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 AL022328.1-201ENST00000610050 478 ntBASIC12.81□□□□□ -0.36
CLN8Q9UBY8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 MROH4P-201ENST00000431302 1578 ntBASIC12.81□□□□□ -0.36
CLN8Q9UBY8 CICP14-201ENST00000629111 2732 ntBASIC12.81□□□□□ -0.36
CLN8Q9UBY8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CLN8Q9UBY8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 OR8S1-201ENST00000310194 1080 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 ACKR1-201ENST00000368121 1240 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 NUS1P3-201ENST00000423502 862 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 GHSR-202ENST00000427970 912 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 KRT17P8-201ENST00000540749 863 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 BTNL10-201ENST00000595971 695 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 AC005252.2-201ENST00000624630 1141 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 LINC00528-201ENST00000600723 2160 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 WASH3P-207ENST00000560956 1394 ntBASIC12.8□□□□□ -0.36
CLN8Q9UBY8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLN8Q9UBY8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLN8Q9UBY8 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms