Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 AC098850.1-201ENST00000419919 790 ntBASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 FAM207CP-201ENST00000443486 507 ntBASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 MYCLP2-201ENST00000449268 967 ntBASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 AL603764.1-201ENST00000636452 321 ntBASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 AC097359.2-201ENST00000604992 2389 ntBASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS29Q9UBQ0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 RNU1-114P-201ENST00000365297 166 ntBASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ENPP7P5-201ENST00000541031 1031 ntBASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 CHCHD2P3-201ENST00000603038 451 ntBASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
VPS29Q9UBQ0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 SBF1P1-201ENST00000444527 5631 ntBASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.46□□□□□ -0.1
VPS29Q9UBQ0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS29Q9UBQ0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms