Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.02■□□□□ 0.48
RTN4Q9NQC3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AC136632.2-201ENST00000512891 861 ntBASIC18.02■□□□□ 0.48
RTN4Q9NQC3 IGHV3-65-201ENST00000523210 341 ntBASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 AL034374.2-201ENST00000605281 548 ntBASIC18.02■□□□□ 0.48
RTN4Q9NQC3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4Q9NQC3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4Q9NQC3 AC011477.6-201ENST00000604980 1927 ntBASIC18.02■□□□□ 0.47
RTN4Q9NQC3 AL445209.1-201ENST00000607269 3491 ntBASIC18.02■□□□□ 0.47
RTN4Q9NQC3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 AC105053.1-201ENST00000366278 1711 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 MEX3B-202ENST00000558133 4333 ntBASIC18.01■□□□□ 0.47
RTN4Q9NQC3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.01■□□□□ 0.47
RTN4Q9NQC3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 HCG4P8-203ENST00000443049 980 ntBASIC18.01■□□□□ 0.47
RTN4Q9NQC3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 AC012569.1-201ENST00000591191 1524 ntBASIC18.01■□□□□ 0.47
RTN4Q9NQC3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 KRT8P44-201ENST00000441609 1350 ntBASIC18.01■□□□□ 0.47
RTN4Q9NQC3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4Q9NQC3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18■□□□□ 0.47
RTN4Q9NQC3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RTN4Q9NQC3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RTN4Q9NQC3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18■□□□□ 0.47
RTN4Q9NQC3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
RTN4Q9NQC3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
RTN4Q9NQC3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC18■□□□□ 0.47
RTN4Q9NQC3 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTN4Q9NQC3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC18■□□□□ 0.47
RTN4Q9NQC3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms