Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL354702.1-201ENST00000442006 1960 ntBASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 AC244394.1-201ENST00000435000 1665 ntBASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KIAA1549Q9HCM3 E2F3P2-201ENST00000447755 1422 ntBASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 AC005077.2-201ENST00000449786 690 ntBASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 AC131206.1-201ENST00000538078 1211 ntBASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 AC138649.2-201ENST00000615886 705 ntBASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
KIAA1549Q9HCM3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC010141.1-201ENST00000411585 623 ntBASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 SPTLC1P5-201ENST00000450718 252 ntBASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 EIF4HP1-201ENST00000453115 687 ntBASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC022447.6-201ENST00000515522 438 ntBASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC023824.1-201ENST00000562945 2975 ntBASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC005962.1-201ENST00000584100 773 ntBASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 AC068587.8-201ENST00000641239 219 ntBASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KIAA1549Q9HCM3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 MTHFR-210ENST00000641407 2387 ntBASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 TPT1P11-201ENST00000458482 498 ntBASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 HLA-J-204ENST00000495278 958 ntBASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 AL645939.5-201ENST00000606834 243 ntBASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
KIAA1549Q9HCM3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms