Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 MARK2P5-201ENST00000507649 634 ntBASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 MIR4783-201ENST00000580343 82 ntBASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 AC002472.3-201ENST00000640124 621 ntBASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 AC068587.8-201ENST00000641239 219 ntBASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 AC112693.3-201ENST00000624819 1983 ntBASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 AC087481.3-201ENST00000602886 1894 ntBASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNGAP1Q96PV0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AC010141.1-201ENST00000411585 623 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 TMEM198B-204ENST00000484016 896 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AL161670.2-201ENST00000557650 1227 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 FGFR3P5-201ENST00000564496 886 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 RN7SL574P-201ENST00000581512 297 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AC128714.1-201ENST00000637035 887 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AL805961.1-203ENST00000641078 1258 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AL513477.1-201ENST00000602865 2407 ntBASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNGAP1Q96PV0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.02■□□□□ 0.32
SYNGAP1Q96PV0 AL136295.7-201ENST00000619226 1200 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms