Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC073548.1-201ENST00000624088 1882 ntBASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHMP6Q96FZ7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 AC020658.7-201ENST00000624274 2442 ntBASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 AC083964.2-201ENST00000623988 2396 ntBASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 AC023794.5-201ENST00000564380 2157 ntBASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHMP6Q96FZ7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AC019294.4-201ENST00000561777 2905 ntBASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AL022342.1-201ENST00000400363 863 ntBASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AZGP1P1-201ENST00000411909 902 ntBASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AL138918.1-201ENST00000568306 659 ntBASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.23■□□□□ 0.03
CHMP6Q96FZ7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AC104457.1-201ENST00000401024 814 ntBASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 AC004945.1-201ENST00000416738 983 ntBASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 FAM58CP-201ENST00000435741 640 ntBASIC15.22■□□□□ 0.03
CHMP6Q96FZ7 POLD2P1-201ENST00000511220 997 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms