Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 AC006504.5-208ENST00000588784 2401 ntBASIC15.31■□□□□ 0.04
RTP4Q96DX8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 AC132938.2-201ENST00000579188 680 ntBASIC15.31■□□□□ 0.04
RTP4Q96DX8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 AL591163.1-201ENST00000641757 987 ntBASIC15.31■□□□□ 0.04
RTP4Q96DX8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 LRRC59-203ENST00000576448 1531 ntBASIC15.31■□□□□ 0.04
RTP4Q96DX8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RTP4Q96DX8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTP4Q96DX8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 AC090505.1-201ENST00000430515 1834 ntBASIC15.3■□□□□ 0.04
RTP4Q96DX8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 IGHV3-71-201ENST00000523324 359 ntBASIC15.3■□□□□ 0.04
RTP4Q96DX8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 CTBP2P3-201ENST00000585629 1255 ntBASIC15.3■□□□□ 0.04
RTP4Q96DX8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 AC004466.1-201ENST00000599515 1080 ntBASIC15.3■□□□□ 0.04
RTP4Q96DX8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTP4Q96DX8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RTP4Q96DX8 AL928921.2-201ENST00000641325 2442 ntBASIC15.29■□□□□ 0.04
RTP4Q96DX8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RTP4Q96DX8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTP4Q96DX8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms