Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 ACTG1P3-201ENST00000431775 1114 ntBASIC16.01■□□□□ 0.15
DDX1Q92499 GOLGA2P4-201ENST00000441462 777 ntBASIC16.01■□□□□ 0.15
DDX1Q92499 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.01■□□□□ 0.15
DDX1Q92499 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.01■□□□□ 0.15
DDX1Q92499 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.01■□□□□ 0.15
DDX1Q92499 AC139749.1-202ENST00000617529 3139 ntBASIC16.01■□□□□ 0.15
DDX1Q92499 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
DDX1Q92499 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.01■□□□□ 0.15
DDX1Q92499 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.01■□□□□ 0.15
DDX1Q92499 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 LRRC59-203ENST00000576448 1531 ntBASIC16■□□□□ 0.15
DDX1Q92499 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 AC003102.2-201ENST00000589195 1469 ntBASIC16■□□□□ 0.15
DDX1Q92499 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16■□□□□ 0.15
DDX1Q92499 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16■□□□□ 0.15
DDX1Q92499 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
DDX1Q92499 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16■□□□□ 0.15
DDX1Q92499 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16■□□□□ 0.15
DDX1Q92499 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
DDX1Q92499 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16■□□□□ 0.15
DDX1Q92499 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16■□□□□ 0.15
DDX1Q92499 AC009486.1-201ENST00000569860 813 ntBASIC16■□□□□ 0.15
DDX1Q92499 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16■□□□□ 0.15
DDX1Q92499 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16■□□□□ 0.15
DDX1Q92499 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16■□□□□ 0.15
DDX1Q92499 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16■□□□□ 0.15
DDX1Q92499 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16■□□□□ 0.15
DDX1Q92499 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16■□□□□ 0.15
DDX1Q92499 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
DDX1Q92499 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16■□□□□ 0.15
DDX1Q92499 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
DDX1Q92499 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
DDX1Q92499 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
DDX1Q92499 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.99■□□□□ 0.15
DDX1Q92499 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
DDX1Q92499 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
DDX1Q92499 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
DDX1Q92499 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.99■□□□□ 0.15
DDX1Q92499 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 AC012441.1-201ENST00000446669 685 ntBASIC15.99■□□□□ 0.15
DDX1Q92499 CROCCP4-201ENST00000457096 498 ntBASIC15.99■□□□□ 0.15
DDX1Q92499 AC099548.2-209ENST00000480264 625 ntBASIC15.99■□□□□ 0.15
DDX1Q92499 KRT18P25-201ENST00000508931 1278 ntBASIC15.99■□□□□ 0.15
DDX1Q92499 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.99■□□□□ 0.15
DDX1Q92499 MIR5189-201ENST00000577370 114 ntBASIC15.99■□□□□ 0.15
DDX1Q92499 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 AC015802.1-201ENST00000588104 1449 ntBASIC15.99■□□□□ 0.15
DDX1Q92499 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.99■□□□□ 0.15
DDX1Q92499 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DDX1Q92499 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms