Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 HCG4P8-203ENST00000443049 980 ntBASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 AC074386.1-202ENST00000463561 864 ntBASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SMIM4Q8WVI0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.35
SMIM4Q8WVI0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 RN7SL832P-201ENST00000607781 1756 ntBASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 SPDYE17-201ENST00000412399 783 ntBASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 AL355306.1-201ENST00000415580 579 ntBASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 AC074338.1-201ENST00000416825 156 ntBASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 AC018845.2-201ENST00000568326 409 ntBASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 MIR7706-201ENST00000613747 67 ntBASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.89□□□□□ -0.35
SMIM4Q8WVI0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM4Q8WVI0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM4Q8WVI0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM4Q8WVI0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SMIM4Q8WVI0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SMIM4Q8WVI0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.88□□□□□ -0.35
SMIM4Q8WVI0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.88□□□□□ -0.35
SMIM4Q8WVI0 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms