Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 DUX4L47-201ENST00000566374 394 ntBASIC20.94■□□□□ 0.94
TMC1Q8TDI8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 AL023775.1-201ENST00000454907 1746 ntBASIC20.94■□□□□ 0.94
TMC1Q8TDI8 CLUHP2-201ENST00000426660 1303 ntBASIC20.94■□□□□ 0.94
TMC1Q8TDI8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMC1Q8TDI8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 LINC00528-201ENST00000600723 2160 ntBASIC20.93■□□□□ 0.94
TMC1Q8TDI8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 MIR1247-201ENST00000408206 136 ntBASIC20.93■□□□□ 0.94
TMC1Q8TDI8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 AC104982.3-201ENST00000581995 514 ntBASIC20.93■□□□□ 0.94
TMC1Q8TDI8 PPY2P-201ENST00000582808 702 ntBASIC20.93■□□□□ 0.94
TMC1Q8TDI8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 AL096828.3-201ENST00000615354 462 ntBASIC20.93■□□□□ 0.94
TMC1Q8TDI8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 KRT8P4-201ENST00000509735 1454 ntBASIC20.93■□□□□ 0.94
TMC1Q8TDI8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.93■□□□□ 0.94
TMC1Q8TDI8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 RN7SL713P-201ENST00000582127 302 ntBASIC20.92■□□□□ 0.94
TMC1Q8TDI8 AC073413.1-201ENST00000603927 732 ntBASIC20.92■□□□□ 0.94
TMC1Q8TDI8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMC1Q8TDI8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms