Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AC004898.1-201ENST00000451057 766 ntBASIC16.39■□□□□ 0.21
VPS52Q8N1B4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 PRSS30P-206ENST00000641773 873 ntBASIC16.39■□□□□ 0.21
VPS52Q8N1B4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VPS52Q8N1B4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 AC136621.1-201ENST00000624017 2304 ntBASIC16.38■□□□□ 0.21
VPS52Q8N1B4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.38■□□□□ 0.21
VPS52Q8N1B4 SLC25A24P2-201ENST00000415059 510 ntBASIC16.38■□□□□ 0.21
VPS52Q8N1B4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 AKR7A2P1-201ENST00000460134 915 ntBASIC16.38■□□□□ 0.21
VPS52Q8N1B4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 AL096828.3-201ENST00000615354 462 ntBASIC16.38■□□□□ 0.21
VPS52Q8N1B4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.38■□□□□ 0.21
VPS52Q8N1B4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VPS52Q8N1B4 TMBIM7P-203ENST00000641617 1718 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms