Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 AC244107.1-201ENST00000442033 332 ntBASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 PPY2P-201ENST00000582808 702 ntBASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 AC013726.1-201ENST00000563747 2285 ntBASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 KRT8P4-201ENST00000509735 1454 ntBASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
C9orf40Q8IXQ3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 AC004945.1-201ENST00000416738 983 ntBASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 HOMER2P2-201ENST00000451621 847 ntBASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 AL583810.1-201ENST00000553344 1045 ntBASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 MIR4683-201ENST00000579659 81 ntBASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 MIR4741-201ENST00000579822 90 ntBASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 AC010328.2-201ENST00000597698 1111 ntBASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C9orf40Q8IXQ3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C9orf40Q8IXQ3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms