Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 KRT8P14-201ENST00000414254 1442 ntBASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 KRT8P44-201ENST00000441609 1350 ntBASIC15.75■□□□□ 0.11
RFWD3Q6PCD5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 FAM197Y7-201ENST00000432892 766 ntBASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 BNIP3P42-201ENST00000454982 569 ntBASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AL590640.2-201ENST00000457038 527 ntBASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AP000812.2-201ENST00000538934 718 ntBASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 BNIP3P29-201ENST00000598302 571 ntBASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AC011447.5-201ENST00000616168 564 ntBASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 MIR6752-201ENST00000618442 71 ntBASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.74■□□□□ 0.11
RFWD3Q6PCD5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 AC013726.1-201ENST00000563747 2285 ntBASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 AC099336.1-201ENST00000417053 1171 ntBASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 EIF3FP3-201ENST00000434851 1086 ntBASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
RFWD3Q6PCD5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms