Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 DUX4L46-201ENST00000566845 751 ntBASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 RN7SL774P-201ENST00000577467 290 ntBASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 AC106872.11-201ENST00000605838 421 ntBASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 AC103702.1-201ENST00000548801 2630 ntBASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RNFT1Q5M7Z0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 AL603841.1-201ENST00000430516 664 ntBASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 KLF2P1-201ENST00000447438 1042 ntBASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 AC005324.6-201ENST00000587972 613 ntBASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 AC097724.1-201ENST00000609581 426 ntBASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 AC068587.8-201ENST00000641239 219 ntBASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RNFT1Q5M7Z0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 TUBB8P8-201ENST00000458717 1058 ntBASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 RPL18P13-201ENST00000478088 569 ntBASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 AC013355.1-201ENST00000562625 723 ntBASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 RN7SL163P-201ENST00000583100 276 ntBASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 AP001505.2-201ENST00000616815 443 ntBASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RNFT1Q5M7Z0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms