Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HSPG2P98160 SPTLC1P3-201ENST00000403408 259 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC8.96□□□□□ -0.98
HSPG2P98160 EEF1GP8-201ENST00000506566 1154 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC8.96□□□□□ -0.98
HSPG2P98160 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC8.96□□□□□ -0.98
HSPG2P98160 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC8.96□□□□□ -0.98
HSPG2P98160 AC120498.7-201ENST00000562876 330 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
HSPG2P98160 LINC00244-201ENST00000625073 613 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC8.96□□□□□ -0.98
HSPG2P98160 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HSPG2P98160 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HSPG2P98160 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HSPG2P98160 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC8.96□□□□□ -0.98
HSPG2P98160 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HSPG2P98160 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
HSPG2P98160 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
HSPG2P98160 NRADDP-201ENST00000437305 691 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 RN7SL767P-201ENST00000493013 295 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 AC011431.1-201ENST00000512971 230 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
HSPG2P98160 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC8.96□□□□□ -0.98
HSPG2P98160 RN7SL556P-201ENST00000582856 298 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 GAS7-216ENST00000583882 553 ntTSL 5 BASIC8.96□□□□□ -0.98
HSPG2P98160 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC8.96□□□□□ -0.98
HSPG2P98160 AC113385.2-201ENST00000614465 762 ntBASIC8.96□□□□□ -0.98
HSPG2P98160 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HSPG2P98160 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
HSPG2P98160 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 RNASEH2CP1-201ENST00000454281 502 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 RN7SL340P-201ENST00000470792 296 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC8.95□□□□□ -0.98
HSPG2P98160 ABCC6P1-203ENST00000565566 1170 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 NT5C-204ENST00000578337 582 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 U73169.1-201ENST00000395152 367 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 AC133141.1-201ENST00000443015 339 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 URB1-AS1-201ENST00000534991 831 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 SRP14-208ENST00000560773 468 ntTSL 3 BASIC8.95□□□□□ -0.98
HSPG2P98160 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC8.95□□□□□ -0.98
HSPG2P98160 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC8.95□□□□□ -0.98
HSPG2P98160 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 STK33-217ENST00000534493 1895 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC8.95□□□□□ -0.98
HSPG2P98160 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 OR7E12P-201ENST00000344740 973 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC8.95□□□□□ -0.98
HSPG2P98160 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 LINP1-201ENST00000417112 917 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 AC073869.2-201ENST00000417338 1026 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 CLPP-205ENST00000596605 646 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 AC090616.6-203ENST00000579186 1945 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 KRT8P18-201ENST00000413425 1445 ntBASIC8.95□□□□□ -0.98
HSPG2P98160 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC8.95□□□□□ -0.98
HSPG2P98160 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
HSPG2P98160 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC8.95□□□□□ -0.98
HSPG2P98160 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HSPG2P98160 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 AL627095.1-201ENST00000414775 321 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 AC000077.1-201ENST00000420012 953 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms