Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC092552.1-201ENST00000547243 906 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.21□□□□□ -0.45
CX3CL1P78423 SAMD11P1-201ENST00000571429 661 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC107373.2-201ENST00000607735 490 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 AC007431.3-201ENST00000623221 587 ntBASIC12.21□□□□□ -0.45
CX3CL1P78423 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.21□□□□□ -0.45
CX3CL1P78423 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CX3CL1P78423 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
CX3CL1P78423 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CX3CL1P78423 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
CX3CL1P78423 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.21□□□□□ -0.46
CX3CL1P78423 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CX3CL1P78423 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CX3CL1P78423 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.21□□□□□ -0.46
CX3CL1P78423 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.21□□□□□ -0.46
CX3CL1P78423 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.21□□□□□ -0.46
CX3CL1P78423 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CX3CL1P78423 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.21□□□□□ -0.46
CX3CL1P78423 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.21□□□□□ -0.46
CX3CL1P78423 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.21□□□□□ -0.46
CX3CL1P78423 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CX3CL1P78423 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CX3CL1P78423 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CX3CL1P78423 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
CX3CL1P78423 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.2□□□□□ -0.46
CX3CL1P78423 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
CX3CL1P78423 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 INTS4P2-202ENST00000614726 2019 ntBASIC12.2□□□□□ -0.46
CX3CL1P78423 AL138799.1-201ENST00000448213 1675 ntBASIC12.2□□□□□ -0.46
CX3CL1P78423 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.2□□□□□ -0.46
CX3CL1P78423 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.2□□□□□ -0.46
CX3CL1P78423 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 AC098850.1-201ENST00000419919 790 ntBASIC12.2□□□□□ -0.46
CX3CL1P78423 AL442647.2-201ENST00000429864 857 ntBASIC12.2□□□□□ -0.46
CX3CL1P78423 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.2□□□□□ -0.46
CX3CL1P78423 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.2□□□□□ -0.46
CX3CL1P78423 AC190387.1-201ENST00000551683 408 ntBASIC12.2□□□□□ -0.46
CX3CL1P78423 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
CX3CL1P78423 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.2□□□□□ -0.46
CX3CL1P78423 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.2□□□□□ -0.46
CX3CL1P78423 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.2□□□□□ -0.46
CX3CL1P78423 AC093813.1-201ENST00000605066 256 ntBASIC12.2□□□□□ -0.46
CX3CL1P78423 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.2□□□□□ -0.46
CX3CL1P78423 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.2□□□□□ -0.46
CX3CL1P78423 AJ011931.1-201ENST00000618749 2492 ntBASIC12.2□□□□□ -0.46
CX3CL1P78423 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CX3CL1P78423 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CX3CL1P78423 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CX3CL1P78423 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.19□□□□□ -0.46
CX3CL1P78423 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CX3CL1P78423 AC015656.1-201ENST00000624209 3578 ntBASIC12.19□□□□□ -0.46
CX3CL1P78423 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CX3CL1P78423 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CX3CL1P78423 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms