Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.4□□□□□ -0.26
LHX2P50458 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 LINC00528-201ENST00000600723 2160 ntBASIC13.4□□□□□ -0.26
LHX2P50458 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LHX2P50458 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.4□□□□□ -0.26
LHX2P50458 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.4□□□□□ -0.26
LHX2P50458 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 FAM8A2P-201ENST00000528813 1142 ntBASIC13.4□□□□□ -0.26
LHX2P50458 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.4□□□□□ -0.26
LHX2P50458 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.4□□□□□ -0.26
LHX2P50458 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
LHX2P50458 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.4□□□□□ -0.26
LHX2P50458 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.4□□□□□ -0.26
LHX2P50458 AL136301.1-201ENST00000615830 422 ntBASIC13.4□□□□□ -0.26
LHX2P50458 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.4□□□□□ -0.26
LHX2P50458 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.4□□□□□ -0.26
LHX2P50458 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.4□□□□□ -0.26
LHX2P50458 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.4□□□□□ -0.26
LHX2P50458 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.4□□□□□ -0.26
LHX2P50458 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LHX2P50458 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LHX2P50458 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.4□□□□□ -0.26
LHX2P50458 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LHX2P50458 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.39□□□□□ -0.27
LHX2P50458 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.39□□□□□ -0.27
LHX2P50458 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LHX2P50458 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 FLJ16779-201ENST00000612722 7638 ntBASIC13.39□□□□□ -0.27
LHX2P50458 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.39□□□□□ -0.27
LHX2P50458 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.39□□□□□ -0.27
LHX2P50458 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 AL354877.1-201ENST00000424412 413 ntBASIC13.39□□□□□ -0.27
LHX2P50458 AC006033.1-201ENST00000440505 426 ntBASIC13.39□□□□□ -0.27
LHX2P50458 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 AC104306.2-201ENST00000451877 341 ntBASIC13.39□□□□□ -0.27
LHX2P50458 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.39□□□□□ -0.27
LHX2P50458 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 AC131206.1-201ENST00000538078 1211 ntBASIC13.39□□□□□ -0.27
LHX2P50458 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LHX2P50458 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.39□□□□□ -0.27
LHX2P50458 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.39□□□□□ -0.27
LHX2P50458 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.39□□□□□ -0.27
LHX2P50458 AL118558.3-201ENST00000607414 1079 ntBASIC13.39□□□□□ -0.27
LHX2P50458 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
LHX2P50458 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 AL008638.5-201ENST00000623814 1298 ntBASIC13.39□□□□□ -0.27
LHX2P50458 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.39□□□□□ -0.27
LHX2P50458 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
LHX2P50458 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
LHX2P50458 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LHX2P50458 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LHX2P50458 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms