Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CEACAM3P40198 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 KRT8P35-201ENST00000483942 1338 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 AC134312.5-201ENST00000568031 1313 ntBASIC12.36□□□□□ -0.43
CEACAM3P40198 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.36□□□□□ -0.43
CEACAM3P40198 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CEACAM3P40198 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.35□□□□□ -0.43
CEACAM3P40198 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CEACAM3P40198 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CEACAM3P40198 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CEACAM3P40198 GRK6P1-201ENST00000400595 1711 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 RNU1-114P-201ENST00000365297 166 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CEACAM3P40198 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 NME2P1-201ENST00000426182 414 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 AC012441.1-201ENST00000446669 685 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 AC093433.1-201ENST00000458048 571 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 RN7SL837P-201ENST00000463010 287 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.35□□□□□ -0.43
CEACAM3P40198 GIMAP3P-201ENST00000495150 836 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CEACAM3P40198 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 MIR5189-201ENST00000577370 114 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 CLUHP6-201ENST00000580789 941 ntBASIC12.35□□□□□ -0.43
CEACAM3P40198 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CEACAM3P40198 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CEACAM3P40198 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CEACAM3P40198 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.35□□□□□ -0.43
CEACAM3P40198 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.35□□□□□ -0.43
CEACAM3P40198 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CEACAM3P40198 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CEACAM3P40198 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.34□□□□□ -0.43
CEACAM3P40198 AC005229.1-201ENST00000392885 409 ntBASIC12.34□□□□□ -0.43
CEACAM3P40198 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CEACAM3P40198 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.34□□□□□ -0.43
CEACAM3P40198 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CEACAM3P40198 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CEACAM3P40198 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.34□□□□□ -0.43
CEACAM3P40198 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms