Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CHMLP26374 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHMLP26374 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMLP26374 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CHMLP26374 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CHMLP26374 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMLP26374 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMLP26374 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMLP26374 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMLP26374 AC245100.3-201ENST00000441281 285 ntBASIC18.09■□□□□ 0.49
CHMLP26374 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMLP26374 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMLP26374 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CHMLP26374 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMLP26374 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMLP26374 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMLP26374 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMLP26374 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHMLP26374 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMLP26374 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHMLP26374 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMLP26374 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CHMLP26374 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.08■□□□□ 0.49
CHMLP26374 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHMLP26374 AC011840.2-201ENST00000563063 1520 ntBASIC18.08■□□□□ 0.49
CHMLP26374 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CHMLP26374 AC117489.1-201ENST00000625169 3217 ntBASIC18.08■□□□□ 0.49
CHMLP26374 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMLP26374 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMLP26374 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMLP26374 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.08■□□□□ 0.49
CHMLP26374 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHMLP26374 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 AC067930.6-201ENST00000623257 4947 ntBASIC18.08■□□□□ 0.48
CHMLP26374 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 AC098614.1-201ENST00000368528 745 ntBASIC18.08■□□□□ 0.48
CHMLP26374 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHMLP26374 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMLP26374 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHMLP26374 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMLP26374 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMLP26374 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMLP26374 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMLP26374 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMLP26374 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHMLP26374 AC138696.2-201ENST00000607376 223 ntBASIC18.08■□□□□ 0.48
CHMLP26374 ENPP7P14-201ENST00000621765 1040 ntBASIC18.08■□□□□ 0.48
CHMLP26374 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMLP26374 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHMLP26374 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMLP26374 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CHMLP26374 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMLP26374 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMLP26374 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms