Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.93■□□□□ 0.14
PTPN1P18031 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN1P18031 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTPN1P18031 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.93■□□□□ 0.14
PTPN1P18031 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.92■□□□□ 0.14
PTPN1P18031 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 KRT8P4-201ENST00000509735 1454 ntBASIC15.92■□□□□ 0.14
PTPN1P18031 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 RN7SKP230-201ENST00000365642 335 ntBASIC15.92■□□□□ 0.14
PTPN1P18031 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTPN1P18031 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.92■□□□□ 0.14
PTPN1P18031 AC004945.1-201ENST00000416738 983 ntBASIC15.92■□□□□ 0.14
PTPN1P18031 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN1P18031 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN1P18031 AC007969.1-201ENST00000433675 447 ntBASIC15.92■□□□□ 0.14
PTPN1P18031 AL355994.2-201ENST00000447882 704 ntBASIC15.92■□□□□ 0.14
PTPN1P18031 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN1P18031 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN1P18031 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.92■□□□□ 0.14
PTPN1P18031 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN1P18031 PPY2P-201ENST00000582808 702 ntBASIC15.92■□□□□ 0.14
PTPN1P18031 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.92■□□□□ 0.14
PTPN1P18031 ZACNP1-201ENST00000612259 710 ntBASIC15.92■□□□□ 0.14
PTPN1P18031 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.92■□□□□ 0.14
PTPN1P18031 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 AC020910.5-201ENST00000623668 1865 ntBASIC15.92■□□□□ 0.14
PTPN1P18031 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN1P18031 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PTPN1P18031 AC003102.2-201ENST00000589195 1469 ntBASIC15.91■□□□□ 0.14
PTPN1P18031 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN1P18031 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PTPN1P18031 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 RN7SKP175-201ENST00000408472 289 ntBASIC15.91■□□□□ 0.14
PTPN1P18031 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN1P18031 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN1P18031 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN1P18031 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN1P18031 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN1P18031 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.91■□□□□ 0.14
PTPN1P18031 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN1P18031 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTPN1P18031 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN1P18031 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PTPN1P18031 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN1P18031 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN1P18031 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN1P18031 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN1P18031 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTPN1P18031 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN1P18031 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN1P18031 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN1P18031 SALL4P5-201ENST00000419001 1760 ntBASIC15.9■□□□□ 0.14
PTPN1P18031 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN1P18031 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN1P18031 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN1P18031 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms