Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 AC007969.1-201ENST00000433675 447 ntBASIC15.25■□□□□ 0.03
HLA-DQB2P05538 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 GAPDHP21-201ENST00000450301 1010 ntBASIC15.25■□□□□ 0.03
HLA-DQB2P05538 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 SALL4P5-201ENST00000419001 1760 ntBASIC15.25■□□□□ 0.03
HLA-DQB2P05538 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DQB2P05538 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 AC011840.2-201ENST00000563063 1520 ntBASIC15.24■□□□□ 0.03
HLA-DQB2P05538 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 RN7SKP230-201ENST00000365642 335 ntBASIC15.24■□□□□ 0.03
HLA-DQB2P05538 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 FAM197Y7-201ENST00000432892 766 ntBASIC15.24■□□□□ 0.03
HLA-DQB2P05538 C2orf27AP3-201ENST00000434123 579 ntBASIC15.24■□□□□ 0.03
HLA-DQB2P05538 MESTP3-201ENST00000503460 968 ntBASIC15.24■□□□□ 0.03
HLA-DQB2P05538 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 AL354718.3-201ENST00000616414 581 ntBASIC15.24■□□□□ 0.03
HLA-DQB2P05538 AC138466.3-201ENST00000619983 221 ntBASIC15.24■□□□□ 0.03
HLA-DQB2P05538 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 CR382287.1-201ENST00000623954 586 ntBASIC15.24■□□□□ 0.03
HLA-DQB2P05538 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DQB2P05538 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms