Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.22■□□□□ 0.19
CHRNA1P02708 AC018635.2-201ENST00000608625 364 ntBASIC16.22■□□□□ 0.19
CHRNA1P02708 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.22■□□□□ 0.19
CHRNA1P02708 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.22■□□□□ 0.19
CHRNA1P02708 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRNA1P02708 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CHRNA1P02708 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 CYP4F23P-201ENST00000593402 1579 ntBASIC16.21■□□□□ 0.19
CHRNA1P02708 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 AC239868.1-201ENST00000369385 493 ntBASIC16.21■□□□□ 0.19
CHRNA1P02708 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA1P02708 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA1P02708 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.21■□□□□ 0.19
CHRNA1P02708 IGLV3-15-201ENST00000518356 244 ntBASIC16.21■□□□□ 0.19
CHRNA1P02708 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.21■□□□□ 0.19
CHRNA1P02708 U62317.3-201ENST00000608319 855 ntBASIC16.21■□□□□ 0.19
CHRNA1P02708 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHRNA1P02708 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CHRNA1P02708 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 KRT8P21-201ENST00000430398 1491 ntBASIC16.21■□□□□ 0.19
CHRNA1P02708 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHRNA1P02708 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.21■□□□□ 0.19
CHRNA1P02708 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHRNA1P02708 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CHRNA1P02708 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CHRNA1P02708 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.21■□□□□ 0.18
CHRNA1P02708 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHRNA1P02708 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA1P02708 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA1P02708 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.2■□□□□ 0.18
CHRNA1P02708 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHRNA1P02708 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CHRNA1P02708 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA1P02708 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CHRNA1P02708 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.2■□□□□ 0.18
CHRNA1P02708 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.2■□□□□ 0.18
CHRNA1P02708 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHRNA1P02708 AL035414.1-201ENST00000451327 857 ntBASIC16.2■□□□□ 0.18
CHRNA1P02708 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.2■□□□□ 0.18
CHRNA1P02708 AC006122.1-201ENST00000493323 440 ntBASIC16.2■□□□□ 0.18
CHRNA1P02708 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.2■□□□□ 0.18
CHRNA1P02708 AL157813.1-201ENST00000612996 587 ntBASIC16.2■□□□□ 0.18
CHRNA1P02708 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms