Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
APOC1P02654 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.43□□□□□ -0.26
APOC1P02654 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
APOC1P02654 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 AC092580.3-201ENST00000430932 139 ntBASIC13.43□□□□□ -0.26
APOC1P02654 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.43□□□□□ -0.26
APOC1P02654 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.43□□□□□ -0.26
APOC1P02654 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.43□□□□□ -0.26
APOC1P02654 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.43□□□□□ -0.26
APOC1P02654 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
APOC1P02654 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
APOC1P02654 SAMD11P1-201ENST00000571429 661 ntBASIC13.43□□□□□ -0.26
APOC1P02654 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.43□□□□□ -0.26
APOC1P02654 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.43□□□□□ -0.26
APOC1P02654 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
APOC1P02654 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.43□□□□□ -0.26
APOC1P02654 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
APOC1P02654 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
APOC1P02654 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.42□□□□□ -0.26
APOC1P02654 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.42□□□□□ -0.26
APOC1P02654 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.42□□□□□ -0.26
APOC1P02654 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.42□□□□□ -0.26
APOC1P02654 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.42□□□□□ -0.26
APOC1P02654 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.42□□□□□ -0.26
APOC1P02654 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.42□□□□□ -0.26
APOC1P02654 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.42□□□□□ -0.26
APOC1P02654 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
APOC1P02654 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.42□□□□□ -0.26
APOC1P02654 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.42□□□□□ -0.26
APOC1P02654 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 AC093028.1-201ENST00000622998 982 ntBASIC13.42□□□□□ -0.26
APOC1P02654 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
APOC1P02654 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
APOC1P02654 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.42□□□□□ -0.26
APOC1P02654 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
APOC1P02654 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
APOC1P02654 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.42□□□□□ -0.26
APOC1P02654 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms