Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
TIMP1P01033 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TIMP1P01033 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.97■□□□□ 0.15
TIMP1P01033 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TIMP1P01033 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.97■□□□□ 0.15
TIMP1P01033 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TIMP1P01033 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TIMP1P01033 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.97■□□□□ 0.15
TIMP1P01033 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TIMP1P01033 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TIMP1P01033 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TIMP1P01033 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.97■□□□□ 0.15
TIMP1P01033 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.97■□□□□ 0.15
TIMP1P01033 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TIMP1P01033 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.96■□□□□ 0.15
TIMP1P01033 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.96■□□□□ 0.15
TIMP1P01033 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 AC090616.6-203ENST00000579186 1945 ntBASIC15.96■□□□□ 0.15
TIMP1P01033 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 PCDHB19P-201ENST00000570871 2371 ntBASIC15.96■□□□□ 0.15
TIMP1P01033 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 RPL35P9-201ENST00000446059 350 ntBASIC15.96■□□□□ 0.15
TIMP1P01033 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.96■□□□□ 0.15
TIMP1P01033 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.96■□□□□ 0.15
TIMP1P01033 AC007952.4-201ENST00000573866 637 ntBASIC15.96■□□□□ 0.15
TIMP1P01033 AC140113.1-201ENST00000603467 169 ntBASIC15.96■□□□□ 0.15
TIMP1P01033 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 AC011471.3-201ENST00000623576 402 ntBASIC15.96■□□□□ 0.15
TIMP1P01033 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TIMP1P01033 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.96■□□□□ 0.15
TIMP1P01033 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.96■□□□□ 0.14
TIMP1P01033 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TIMP1P01033 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMP1P01033 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.95■□□□□ 0.14
TIMP1P01033 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMP1P01033 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.95■□□□□ 0.14
TIMP1P01033 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.95■□□□□ 0.14
TIMP1P01033 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.95■□□□□ 0.14
TIMP1P01033 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.95■□□□□ 0.14
TIMP1P01033 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.95■□□□□ 0.14
TIMP1P01033 AC093909.3-201ENST00000504783 336 ntBASIC15.95■□□□□ 0.14
TIMP1P01033 FAM86KP-201ENST00000509817 987 ntBASIC15.95■□□□□ 0.14
TIMP1P01033 KRT8P1-201ENST00000557533 1207 ntBASIC15.95■□□□□ 0.14
TIMP1P01033 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMP1P01033 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.95■□□□□ 0.14
TIMP1P01033 MIR2392-201ENST00000584881 84 ntBASIC15.95■□□□□ 0.14
TIMP1P01033 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMP1P01033 AC007250.1-201ENST00000608934 338 ntBASIC15.95■□□□□ 0.14
TIMP1P01033 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TIMP1P01033 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TIMP1P01033 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.95■□□□□ 0.14
TIMP1P01033 AP000845.1-201ENST00000581677 2131 ntBASIC15.95■□□□□ 0.14
TIMP1P01033 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TIMP1P01033 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.95■□□□□ 0.14
TIMP1P01033 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.95■□□□□ 0.14
TIMP1P01033 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TIMP1P01033 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TIMP1P01033 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
TIMP1P01033 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TIMP1P01033 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TIMP1P01033 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 AL513523.2-202ENST00000427283 2040 ntBASIC15.94■□□□□ 0.14
TIMP1P01033 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.94■□□□□ 0.14
TIMP1P01033 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TIMP1P01033 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms