Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AL391280.1-201ENST00000506969 1062 ntBASIC16.31■□□□□ 0.2
EXTL3O43909 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 AC079316.1-201ENST00000548397 411 ntBASIC16.31■□□□□ 0.2
EXTL3O43909 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.31■□□□□ 0.2
EXTL3O43909 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.31■□□□□ 0.2
EXTL3O43909 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.31■□□□□ 0.2
EXTL3O43909 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.31■□□□□ 0.2
EXTL3O43909 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EXTL3O43909 AC103702.1-201ENST00000548801 2630 ntBASIC16.31■□□□□ 0.2
EXTL3O43909 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.31■□□□□ 0.2
EXTL3O43909 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 AL513477.1-201ENST00000602865 2407 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 AP000593.2-201ENST00000542775 1433 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.3■□□□□ 0.2
EXTL3O43909 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.3■□□□□ 0.2
EXTL3O43909 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EXTL3O43909 AHCYP2-201ENST00000430630 1300 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 FAM86MP-201ENST00000340703 885 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 MIR1202-201ENST00000408529 83 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.3■□□□□ 0.2
EXTL3O43909 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.3■□□□□ 0.2
EXTL3O43909 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 AC026954.1-201ENST00000429771 1293 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EXTL3O43909 BNIP3P42-201ENST00000454982 569 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.3■□□□□ 0.2
EXTL3O43909 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.3■□□□□ 0.2
EXTL3O43909 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.3■□□□□ 0.2
EXTL3O43909 AP003171.2-201ENST00000528208 925 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.3■□□□□ 0.2
EXTL3O43909 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
EXTL3O43909 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EXTL3O43909 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 BNIP3P29-201ENST00000598302 571 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 OR10B1P-201ENST00000601666 907 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 AC011447.5-201ENST00000616168 564 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 INE2-201ENST00000630399 1874 ntBASIC16.3■□□□□ 0.2
EXTL3O43909 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
EXTL3O43909 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.3■□□□□ 0.2
EXTL3O43909 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.3■□□□□ 0.2
EXTL3O43909 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EXTL3O43909 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.3■□□□□ 0.2
EXTL3O43909 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
EXTL3O43909 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.29■□□□□ 0.2
EXTL3O43909 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.29■□□□□ 0.2
EXTL3O43909 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.29■□□□□ 0.2
EXTL3O43909 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
EXTL3O43909 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.29■□□□□ 0.2
EXTL3O43909 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.29■□□□□ 0.2
EXTL3O43909 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.29■□□□□ 0.2
EXTL3O43909 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EXTL3O43909 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms