Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC004466.1-201ENST00000599515 1080 ntBASIC17.2■□□□□ 0.34
CLIC4Q9Y696 TMEM261P1-201ENST00000604899 340 ntBASIC17.2■□□□□ 0.34
CLIC4Q9Y696 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLIC4Q9Y696 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 TNN-203ENST00000622870 3719 ntTSL 5 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 GRK6P1-201ENST00000400595 1711 ntBASIC17.19■□□□□ 0.34
CLIC4Q9Y696 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 SOCS2P1-201ENST00000417727 557 ntBASIC17.19■□□□□ 0.34
CLIC4Q9Y696 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 AC114812.1-204ENST00000449669 728 ntBASIC17.19■□□□□ 0.34
CLIC4Q9Y696 AC022447.6-201ENST00000515522 438 ntBASIC17.19■□□□□ 0.34
CLIC4Q9Y696 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 AJ011932.1-201ENST00000621707 465 ntBASIC17.19■□□□□ 0.34
CLIC4Q9Y696 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 AL928921.2-201ENST00000641325 2442 ntBASIC17.19■□□□□ 0.34
CLIC4Q9Y696 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLIC4Q9Y696 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AC005840.4-201ENST00000541242 2494 ntBASIC17.18■□□□□ 0.34
CLIC4Q9Y696 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 CLUHP6-201ENST00000580789 941 ntBASIC17.18■□□□□ 0.34
CLIC4Q9Y696 RN7SL204P-201ENST00000582831 262 ntBASIC17.18■□□□□ 0.34
CLIC4Q9Y696 LINC02560-201ENST00000596379 459 ntBASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AC133539.2-201ENST00000604757 467 ntBASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AC004233.3-201ENST00000607794 1269 ntBASIC17.18■□□□□ 0.34
CLIC4Q9Y696 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLIC4Q9Y696 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms