Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 RN7SL589P-201ENST00000481268 310 ntBASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 PDPK2P-202ENST00000562415 1191 ntBASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AC018845.2-201ENST00000568326 409 ntBASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AC099522.2-201ENST00000607001 744 ntBASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 REXO1L1P-201ENST00000379010 6598 ntBASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 MST1P2-201ENST00000457982 2291 ntBASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AC073957.3-201ENST00000609998 6758 ntBASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 REXO1L4P-201ENST00000605109 1937 ntBASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AC073869.1-201ENST00000415574 2762 ntBASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 MIR346-201ENST00000362234 95 ntBASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 IGHV3-62-201ENST00000520057 340 ntBASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 Z83851.2-201ENST00000609564 659 ntBASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
KCNIP3Q9Y2W7 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms