Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SCN11AQ9UI33 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 AC105917.1-201ENST00000506637 2539 ntBASIC18.85■□□□□ 0.61
SCN11AQ9UI33 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 AL031713.1-201ENST00000564813 661 ntBASIC18.85■□□□□ 0.61
SCN11AQ9UI33 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 RN7SL665P-201ENST00000578793 300 ntBASIC18.85■□□□□ 0.61
SCN11AQ9UI33 SIGLEC18P-201ENST00000602271 909 ntBASIC18.85■□□□□ 0.61
SCN11AQ9UI33 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.85■□□□□ 0.61
SCN11AQ9UI33 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 AL355334.1-201ENST00000417713 215 ntBASIC18.84■□□□□ 0.61
SCN11AQ9UI33 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 AC107464.3-201ENST00000609172 737 ntBASIC18.84■□□□□ 0.61
SCN11AQ9UI33 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCN11AQ9UI33 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 AP001065.2-201ENST00000617205 644 ntBASIC18.83■□□□□ 0.61
SCN11AQ9UI33 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCN11AQ9UI33 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SCN11AQ9UI33 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms