Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 MED15P5-201ENST00000423150 992 ntBASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 AP000842.3-202ENST00000569238 1080 ntBASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
C12orf4Q9NQ89 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 AC089987.1-201ENST00000551654 2209 ntBASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 IGHV3-62-201ENST00000520057 340 ntBASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 HNRNPUP1-201ENST00000554987 333 ntBASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 AC027601.4-201ENST00000611259 610 ntBASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 AC092865.6-201ENST00000642101 219 ntBASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
C12orf4Q9NQ89 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf4Q9NQ89 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C12orf4Q9NQ89 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
C12orf4Q9NQ89 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
C12orf4Q9NQ89 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
C12orf4Q9NQ89 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.24□□□□□ -0.29
C12orf4Q9NQ89 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms