Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 KATNBL1P2-201ENST00000433311 835 ntBASIC15.32■□□□□ 0.04
PHOX2BQ99453 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AC018463.1-201ENST00000456674 917 ntBASIC15.32■□□□□ 0.04
PHOX2BQ99453 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AC073413.1-201ENST00000603927 732 ntBASIC15.32■□□□□ 0.04
PHOX2BQ99453 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 MIR6816-201ENST00000620368 66 ntBASIC15.32■□□□□ 0.04
PHOX2BQ99453 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.32■□□□□ 0.04
PHOX2BQ99453 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.32■□□□□ 0.04
PHOX2BQ99453 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHOX2BQ99453 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 RNU1-114P-201ENST00000365297 166 ntBASIC15.31■□□□□ 0.04
PHOX2BQ99453 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 TUBB8P8-201ENST00000458717 1058 ntBASIC15.31■□□□□ 0.04
PHOX2BQ99453 KRT18P43-201ENST00000469825 1281 ntBASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 ALG1L6P-201ENST00000515248 758 ntBASIC15.31■□□□□ 0.04
PHOX2BQ99453 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 RN7SL163P-201ENST00000583100 276 ntBASIC15.31■□□□□ 0.04
PHOX2BQ99453 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC244250.3-201ENST00000620749 366 ntBASIC15.31■□□□□ 0.04
PHOX2BQ99453 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC092384.3-202ENST00000564646 2873 ntBASIC15.31■□□□□ 0.04
PHOX2BQ99453 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AC005622.1-201ENST00000636801 1703 ntBASIC15.31■□□□□ 0.04
PHOX2BQ99453 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms