Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.59□□□□□ -0.23
CPNE4Q96A23 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 DUX4L47-201ENST00000566374 394 ntBASIC13.59□□□□□ -0.23
CPNE4Q96A23 GNRHR2-203ENST00000581100 1187 ntBASIC13.59□□□□□ -0.23
CPNE4Q96A23 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 AL512343.1-201ENST00000605837 169 ntBASIC13.59□□□□□ -0.23
CPNE4Q96A23 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CPNE4Q96A23 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.59□□□□□ -0.23
CPNE4Q96A23 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.58□□□□□ -0.23
CPNE4Q96A23 LILRP1-201ENST00000444199 1370 ntBASIC13.58□□□□□ -0.23
CPNE4Q96A23 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.58□□□□□ -0.23
CPNE4Q96A23 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CPNE4Q96A23 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CPNE4Q96A23 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CPNE4Q96A23 AC055811.4-201ENST00000624039 1754 ntBASIC13.58□□□□□ -0.23
CPNE4Q96A23 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.58□□□□□ -0.24
CPNE4Q96A23 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 AC079776.1-201ENST00000401540 1152 ntBASIC13.58□□□□□ -0.24
CPNE4Q96A23 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 EIF3FP3-201ENST00000434851 1086 ntBASIC13.58□□□□□ -0.24
CPNE4Q96A23 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 AL138709.1-201ENST00000614840 1693 ntBASIC13.58□□□□□ -0.24
CPNE4Q96A23 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CPNE4Q96A23 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms