Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC009093.10-201ENST00000641956 1442 ntBASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 KHSRPP1-201ENST00000427983 1768 ntBASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 RPL5P21-201ENST00000404620 815 ntBASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AC005274.1-201ENST00000623460 802 ntBASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AL451000.1-201ENST00000451300 1186 ntBASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 IGHEP1-201ENST00000521393 651 ntBASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AC010531.8-201ENST00000623341 685 ntBASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
ALMS1Q8TCU4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 SNORA57-201ENST00000383870 149 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 KRT18P4-201ENST00000422599 1288 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 COX5A-205ENST00000568517 582 ntTSL 3 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 BX322534.1-201ENST00000635574 241 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AC215524.1-201ENST00000635696 241 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AC019109.1-201ENST00000401725 1874 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AC138761.6-201ENST00000583997 1423 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 OR7E115P-201ENST00000382617 1024 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AC053503.3-201ENST00000448375 114 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AC117503.4-201ENST00000623229 1418 ntBASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 RPL14-203ENST00000416518 812 ntTSL 3 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC9.79□□□□□ -0.84
ALMS1Q8TCU4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms