Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 MIR1233-2-201ENST00000408138 82 ntBASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 MIR1233-1-201ENST00000408722 82 ntBASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 AC079140.1-201ENST00000508039 487 ntBASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB3IL1Q8TBN0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 LILRP1-201ENST00000444199 1370 ntBASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AL591424.1-201ENST00000442569 1213 ntBASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AC105021.1-202ENST00000570572 669 ntBASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AC025181.2-201ENST00000606994 802 ntBASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AC055717.3-201ENST00000622967 595 ntBASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 AC092902.6-201ENST00000641783 218 ntBASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB3IL1Q8TBN0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 REXO1L1P-201ENST00000379010 6598 ntBASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB3IL1Q8TBN0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms