Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 AC079776.1-201ENST00000401540 1152 ntBASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 KRT43P-201ENST00000434019 910 ntBASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 AC234783.1-201ENST00000441761 496 ntBASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 AL355864.2-201ENST00000447420 863 ntBASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 ACA64.2-201ENST00000459014 129 ntBASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 AL022328.1-201ENST00000610050 478 ntBASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.65■□□□□ 0.42
SMARCC2Q8TAQ2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMARCC2Q8TAQ2 KRT8P14-201ENST00000414254 1442 ntBASIC17.64■□□□□ 0.42
SMARCC2Q8TAQ2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
SMARCC2Q8TAQ2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMARCC2Q8TAQ2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 MSTO2P-201ENST00000314835 1709 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 ACKR1-201ENST00000368121 1240 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 ARSEP1-201ENST00000420443 635 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 ATP5G2P4-201ENST00000442175 420 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 AC012441.1-201ENST00000446669 685 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 BCRP2-202ENST00000447763 634 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 BCRP6-201ENST00000510112 632 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 BCRP7-201ENST00000511549 544 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 AP001889.1-201ENST00000525414 633 ntBASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.64■□□□□ 0.41
SMARCC2Q8TAQ2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.63■□□□□ 0.41
SMARCC2Q8TAQ2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms