Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC6Q8IVU3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HERC6Q8IVU3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HERC6Q8IVU3 TBC1D3J-201ENST00000620719 1426 ntBASIC16.27■□□□□ 0.19
HERC6Q8IVU3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC6Q8IVU3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HERC6Q8IVU3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC6Q8IVU3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HERC6Q8IVU3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 FAM58BP-201ENST00000439056 645 ntBASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AC026434.2-201ENST00000506094 1078 ntBASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AC009779.1-201ENST00000551138 283 ntBASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AC092171.5-201ENST00000608012 942 ntBASIC16.26■□□□□ 0.19
HERC6Q8IVU3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 AC092850.2-201ENST00000623821 2697 ntBASIC16.26■□□□□ 0.19
HERC6Q8IVU3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 E2F3P2-201ENST00000447755 1422 ntBASIC16.26■□□□□ 0.19
HERC6Q8IVU3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HERC6Q8IVU3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 AC078991.1-201ENST00000437297 610 ntBASIC16.25■□□□□ 0.19
HERC6Q8IVU3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HERC6Q8IVU3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 AC068587.6-202ENST00000641839 5619 ntBASIC16.24■□□□□ 0.19
HERC6Q8IVU3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HERC6Q8IVU3 REXO1L5P-201ENST00000622260 2098 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms