Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 AC093433.1-201ENST00000458048 571 ntBASIC13.68□□□□□ -0.22
ATG4DQ86TL0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 AC009486.1-201ENST00000569860 813 ntBASIC13.68□□□□□ -0.22
ATG4DQ86TL0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.68□□□□□ -0.22
ATG4DQ86TL0 INTS4P1-203ENST00000641008 3683 ntBASIC13.68□□□□□ -0.22
ATG4DQ86TL0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ATG4DQ86TL0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 AC005089.1-201ENST00000619486 2241 ntBASIC13.67□□□□□ -0.22
ATG4DQ86TL0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 AC079776.1-201ENST00000401540 1152 ntBASIC13.67□□□□□ -0.22
ATG4DQ86TL0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 ARSEP1-201ENST00000420443 635 ntBASIC13.67□□□□□ -0.22
ATG4DQ86TL0 AC007274.1-201ENST00000439805 662 ntBASIC13.67□□□□□ -0.22
ATG4DQ86TL0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 AC011495.1-201ENST00000498085 584 ntBASIC13.67□□□□□ -0.22
ATG4DQ86TL0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATG4DQ86TL0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ATG4DQ86TL0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATG4DQ86TL0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATG4DQ86TL0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.66□□□□□ -0.22
ATG4DQ86TL0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATG4DQ86TL0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATG4DQ86TL0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms