Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 AC097376.2-205ENST00000610159 5334 ntBASIC15.12■□□□□ 0.01
USP45Q70EL2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.12■□□□□ 0.01
USP45Q70EL2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.12■□□□□ 0.01
USP45Q70EL2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.12■□□□□ 0.01
USP45Q70EL2 AC006001.1-201ENST00000325130 474 ntBASIC15.12■□□□□ 0.01
USP45Q70EL2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 ANKRD19P-201ENST00000338192 862 ntBASIC15.12■□□□□ 0.01
USP45Q70EL2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.12■□□□□ 0.01
USP45Q70EL2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.12■□□□□ 0.01
USP45Q70EL2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 KRT223P-202ENST00000449164 1292 ntBASIC15.12■□□□□ 0.01
USP45Q70EL2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
USP45Q70EL2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.12■□□□□ 0.01
USP45Q70EL2 MIR6775-201ENST00000617557 69 ntBASIC15.12■□□□□ 0.01
USP45Q70EL2 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
USP45Q70EL2 AC006058.4-201ENST00000624016 1670 ntBASIC15.12■□□□□ 0.01
USP45Q70EL2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
USP45Q70EL2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP45Q70EL2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
USP45Q70EL2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.12■□□□□ 0.01
USP45Q70EL2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.12■□□□□ 0.01
USP45Q70EL2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.11■□□□□ 0.01
USP45Q70EL2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 AC023824.1-201ENST00000562945 2975 ntBASIC15.11■□□□□ 0.01
USP45Q70EL2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
USP45Q70EL2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
USP45Q70EL2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.11■□□□□ 0.01
USP45Q70EL2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.11■□□□□ 0.01
USP45Q70EL2 FTLP10-202ENST00000505798 471 ntBASIC15.11■□□□□ 0.01
USP45Q70EL2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.11■□□□□ 0.01
USP45Q70EL2 AC023310.1-201ENST00000554836 735 ntBASIC15.11■□□□□ 0.01
USP45Q70EL2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.11■□□□□ 0.01
USP45Q70EL2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.11■□□□□ 0.01
USP45Q70EL2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.11■□□□□ 0.01
USP45Q70EL2 AL359881.2-201ENST00000602973 570 ntBASIC15.11■□□□□ 0.01
USP45Q70EL2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.11■□□□□ 0.01
USP45Q70EL2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.11■□□□□ 0.01
USP45Q70EL2 COX11-210ENST00000639671 696 ntBASIC15.11■□□□□ 0.01
USP45Q70EL2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.11■□□□□ 0.01
USP45Q70EL2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
USP45Q70EL2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.11■□□□□ 0.01
USP45Q70EL2 AC023090.2-201ENST00000625182 2110 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms