Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL16A1Q07092 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL16A1Q07092 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL16A1Q07092 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL16A1Q07092 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
COL16A1Q07092 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL16A1Q07092 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL16A1Q07092 LINC00265-2P-201ENST00000413372 782 ntBASIC19.53■□□□□ 0.72
COL16A1Q07092 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC19.53■□□□□ 0.72
COL16A1Q07092 AC004801.1-201ENST00000549557 360 ntBASIC19.53■□□□□ 0.72
COL16A1Q07092 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
COL16A1Q07092 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.53■□□□□ 0.72
COL16A1Q07092 AC026336.4-201ENST00000624565 1050 ntBASIC19.53■□□□□ 0.72
COL16A1Q07092 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC19.53■□□□□ 0.72
COL16A1Q07092 AC245369.7-201ENST00000631386 350 ntBASIC19.53■□□□□ 0.72
COL16A1Q07092 AL050341.2-201ENST00000567508 1541 ntBASIC19.53■□□□□ 0.72
COL16A1Q07092 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.53■□□□□ 0.72
COL16A1Q07092 AC007952.5-201ENST00000572818 1486 ntBASIC19.53■□□□□ 0.72
COL16A1Q07092 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL16A1Q07092 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
COL16A1Q07092 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.52■□□□□ 0.72
COL16A1Q07092 AP000845.1-201ENST00000581677 2131 ntBASIC19.52■□□□□ 0.72
COL16A1Q07092 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.52■□□□□ 0.72
COL16A1Q07092 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.52■□□□□ 0.72
COL16A1Q07092 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL16A1Q07092 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL16A1Q07092 RPL3P2-204ENST00000413027 1203 ntBASIC19.52■□□□□ 0.72
COL16A1Q07092 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COL16A1Q07092 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL16A1Q07092 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL16A1Q07092 AC025594.1-201ENST00000469533 543 ntBASIC19.52■□□□□ 0.72
COL16A1Q07092 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC19.52■□□□□ 0.72
COL16A1Q07092 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC19.52■□□□□ 0.72
COL16A1Q07092 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC19.52■□□□□ 0.72
COL16A1Q07092 ACY3-202ENST00000529256 933 ntTSL 3 BASIC19.52■□□□□ 0.72
COL16A1Q07092 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC19.52■□□□□ 0.72
COL16A1Q07092 AC091304.3-201ENST00000566500 716 ntBASIC19.52■□□□□ 0.72
COL16A1Q07092 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COL16A1Q07092 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC19.52■□□□□ 0.72
COL16A1Q07092 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC19.52■□□□□ 0.72
COL16A1Q07092 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
COL16A1Q07092 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.52■□□□□ 0.72
COL16A1Q07092 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COL16A1Q07092 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL16A1Q07092 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COL16A1Q07092 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COL16A1Q07092 AC117503.4-201ENST00000623229 1418 ntBASIC19.52■□□□□ 0.71
COL16A1Q07092 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 MED15P3-201ENST00000413613 326 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 ZNF877P-201ENST00000437614 612 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 GALP-202ENST00000440823 889 ntTSL 5 BASIC19.51■□□□□ 0.71
COL16A1Q07092 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC19.51■□□□□ 0.71
COL16A1Q07092 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC19.51■□□□□ 0.71
COL16A1Q07092 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC19.51■□□□□ 0.71
COL16A1Q07092 TREX1-203ENST00000456089 629 ntTSL 3 BASIC19.51■□□□□ 0.71
COL16A1Q07092 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC19.51■□□□□ 0.71
COL16A1Q07092 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 AC092910.2-201ENST00000491262 348 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 AC011431.1-201ENST00000512971 230 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 CES1P2-201ENST00000566467 1242 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 URAHP-205ENST00000610227 398 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 AL591471.1-201ENST00000621855 229 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.51■□□□□ 0.71
COL16A1Q07092 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.51■□□□□ 0.71
COL16A1Q07092 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.51■□□□□ 0.71
COL16A1Q07092 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 OR7E115P-201ENST00000382617 1024 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COL16A1Q07092 FDPSP7-201ENST00000429043 1054 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC19.51■□□□□ 0.71
COL16A1Q07092 ALG1L15P-201ENST00000482834 794 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC19.51■□□□□ 0.71
COL16A1Q07092 AC005746.3-201ENST00000614751 393 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 AC091769.1-201ENST00000619576 568 ntBASIC19.51■□□□□ 0.71
COL16A1Q07092 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.5■□□□□ 0.71
COL16A1Q07092 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL16A1Q07092 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms