Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.23■□□□□ 0.51
SCN7AQ01118 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.23■□□□□ 0.51
SCN7AQ01118 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SCN7AQ01118 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SCN7AQ01118 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.23■□□□□ 0.51
SCN7AQ01118 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.23■□□□□ 0.51
SCN7AQ01118 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.23■□□□□ 0.51
SCN7AQ01118 AL157792.1-201ENST00000488281 530 ntBASIC18.23■□□□□ 0.51
SCN7AQ01118 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.23■□□□□ 0.51
SCN7AQ01118 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.23■□□□□ 0.51
SCN7AQ01118 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.23■□□□□ 0.51
SCN7AQ01118 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.23■□□□□ 0.51
SCN7AQ01118 AC002044.2-201ENST00000624910 970 ntBASIC18.23■□□□□ 0.51
SCN7AQ01118 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.23■□□□□ 0.51
SCN7AQ01118 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SCN7AQ01118 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.23■□□□□ 0.51
SCN7AQ01118 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SCN7AQ01118 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SCN7AQ01118 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.23■□□□□ 0.51
SCN7AQ01118 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCN7AQ01118 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SCN7AQ01118 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.23■□□□□ 0.51
SCN7AQ01118 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.23■□□□□ 0.51
SCN7AQ01118 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.23■□□□□ 0.51
SCN7AQ01118 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 BRD7P5-201ENST00000299197 1822 ntBASIC18.22■□□□□ 0.51
SCN7AQ01118 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 CELP-201ENST00000411440 1249 ntTSL 5 BASIC18.22■□□□□ 0.51
SCN7AQ01118 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.22■□□□□ 0.51
SCN7AQ01118 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 RN7SL530P-201ENST00000485097 298 ntBASIC18.22■□□□□ 0.51
SCN7AQ01118 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 ALG1L13P-202ENST00000519320 584 ntBASIC18.22■□□□□ 0.51
SCN7AQ01118 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.22■□□□□ 0.51
SCN7AQ01118 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.22■□□□□ 0.51
SCN7AQ01118 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCN7AQ01118 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 AC006504.5-208ENST00000588784 2401 ntBASIC18.22■□□□□ 0.51
SCN7AQ01118 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.22■□□□□ 0.51
SCN7AQ01118 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCN7AQ01118 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SCN7AQ01118 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.22■□□□□ 0.51
SCN7AQ01118 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.22■□□□□ 0.51
SCN7AQ01118 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.22■□□□□ 0.51
SCN7AQ01118 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SCN7AQ01118 AP000322.3-201ENST00000608665 388 ntBASIC18.22■□□□□ 0.51
SCN7AQ01118 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN7AQ01118 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN7AQ01118 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SCN7AQ01118 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SCN7AQ01118 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.21■□□□□ 0.51
SCN7AQ01118 MIR1227-201ENST00000408484 88 ntBASIC18.21■□□□□ 0.51
SCN7AQ01118 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.21■□□□□ 0.51
SCN7AQ01118 RN7SL470P-201ENST00000583069 259 ntBASIC18.21■□□□□ 0.51
SCN7AQ01118 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN7AQ01118 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN7AQ01118 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN7AQ01118 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.21■□□□□ 0.51
SCN7AQ01118 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN7AQ01118 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
SCN7AQ01118 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
SCN7AQ01118 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.2■□□□□ 0.5
SCN7AQ01118 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCN7AQ01118 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.2■□□□□ 0.5
SCN7AQ01118 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms